AVR devices with a JTAG port can be programmed through this interface.
Mount the routing and socket card and the target device. See the Socket System section on how to do this.
Connect a 10-wire cable between the two 10-pins JTAG headers on the STK600. See picture below.
Ensure that the VTARGET jumper is mounted, and that the voltage is the within the operating range for the target device.
See the Programming Dialog pages in the AVR Studio help file or the AVR32 Studio help for information on how to program the device using JTAG.
The pinout of the JTAG header is shown below:
See also: In-System Programming of an External Target System