Top > All Packages in Directory > Melting

Melting - Nearest-neighbor compilation of nucleic acid hybridation

Melting computes, for a nucleic acid duplex, the enthalpy and entropy of the helix-coil transition, and then its melting temperatures. Three types of hybridisation are possible: DNA/DNA, DNA/RNA, and RNA/RNA. The program uses the method of nearest-neighbors. The set of thermodymanic parameters can easily be changed, for instance following an experimental breakthrough. The program is coded in ISO C and can be compiled on any operating system. Some Perl scripts are provided to show how melting can be used as a block to construct more ambitious programs.

Obtaining

Web pagehttp://www.pasteur.fr/recherche/unites/neubiomol/meltinghome.html
Source tarball http://www.pasteur.fr/recherche/unites/neubiomol/SOFTWARES/melting4_2e.tar.gz
Version 4.2 (stable) released on 2002-02-21
Licensed under The GNU General Public License, Version 2 or later.
This is a GNU package.

Documentation
User manual included and available in HTML format from http://www.pasteur.fr/recherche/unites/neubiomol/SOFTWARES/melting/melting.html
Support contacts

Help List<[email protected]> http://sympa.pasteur.fr/wws/info/melting
Developer List<[email protected]> http://sympa.pasteur.fr/wws/info/melting
Bug List<[email protected]> http://sympa.pasteur.fr/wws/info/melting

Project contacts

Maintainers
Developers
Contributors

Related information

Interfacescommand line, X Window System, web
Source languagesC, Perl
Use requirementsPerl, Perl/tk
Weak prerequisitesPerl, Perl/tk

Entry information

License verified byJanet Casey <[email protected]> on 2001-01-31
Entry compiled byJanet Casey <[email protected]>

Categories


The copyright licensing notice below applies to this text. The software described in this text has its own copyright notice and license, which can usually be found in the distribution itself.

Copyright © 2000, 2001, 2002, 2003 Free Software Foundation, Inc.

Permission is granted to copy, distribute, and/or modify this document under the terms of the GNU Free Documentation License, Version 1.1 or any later version published by the Free Software Foundation; with no Invariant Sections, with no Front-Cover Texts, and with no Back-Cover Texts. A copy of this license is included in the file COPYING.DOC.

Please report any problems in this page to [email protected], or find out how you can help fix them.

The FSF provides this directory as a service to the free software community. Please consider donating to the FSF to help support this project.